diff --git a/doc/CMakeLists.txt b/doc/CMakeLists.txt
deleted file mode 100644
index 2baf5fb92e528975d2bc39af4c034d797743b6e1..0000000000000000000000000000000000000000
--- a/doc/CMakeLists.txt
+++ /dev/null
@@ -1,5 +0,0 @@
-#
-#  Copyright 2011 CNRS
-#  Author: Nicolas Mansard (empty doc file ... who else?)
-#
-
diff --git a/doc/Doxyfile.extra.in b/doc/Doxyfile.extra.in
index 5664623a16d547aa2f36aa47d4b387e0b951d763..370db940cef685e6ab73ba9c217366a6c89119e2 100644
--- a/doc/Doxyfile.extra.in
+++ b/doc/Doxyfile.extra.in
@@ -1,4 +1,5 @@
 INPUT                  = @CMAKE_SOURCE_DIR@/include \
+                         @CMAKE_SOURCE_DIR@/src \
                          @CMAKE_SOURCE_DIR@/doc/additionalDoc
 IMAGE_PATH             = @CMAKE_SOURCE_DIR@/doc/pictures
 
diff --git a/doc/additionalDoc/package.hh b/doc/additionalDoc/package.hh
index 42d9a454554056adbfe44a1bb503fe77efcc74bd..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 100644
--- a/doc/additionalDoc/package.hh
+++ b/doc/additionalDoc/package.hh
@@ -1,74 +0,0 @@
-/*
- * Copyright 2010,
- * François Bleibel,
- * Olivier Stasse,
- *
- * CNRS/AIST
- *
- * This file is part of sot-dynamic.
- * sot-dynamic is free software: you can redistribute it and/or
- * modify it under the terms of the GNU Lesser General Public License
- * as published by the Free Software Foundation, either version 3 of
- * the License, or (at your option) any later version.
- * sot-dynamic is distributed in the hope that it will be
- * useful, but WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU Lesser General Public License for more details.  You should
- * have received a copy of the GNU Lesser General Public License along
- * with sot-dynamic.  If not, see <http://www.gnu.org/licenses/>.
- */
-
-/** \mainpage
-\section sot_dynamic_section_introduction Introduction
-
-The sot-dynamic package is a bridge between the stack of tasks framework and the dynamicsJRLJapan library.
-It provides an inverse dynamic model of the robot through dynamic-graph entities.
-More precisely it wraps the newton euler algorithm implemented by the dynamicsJRLJapan library
-to make it accessible for the stack of tasks controllers
-(in the Stack of Tasks Framework as defined in \ref Mansard2007.)
-
-This package depends on the following packages:
-\li dynamicsJRLJapan
-\li sot-core
-\li dynamic-graph
-\li dynamic-graph-python
-Optional packages (for specific support of the hrp2-N robots)
-\li hrp210optimized
-\li hrp2-dynamics
-
-See the JRL umi3218's page on github for instructions on how to download and
-install these packages at https://github.com/jrl-umi3218.
-
-\section python_bindings Python bindings
-
-As most packages based on the dynamic-graph framework (see https://github.com/jrl-umi3218/dynamic-graph),
-the functionnality is exposed through entities. Hence python sub-modules of dynamic_graph  are generated. See <a href="../sphinx-html/index.html">sphinx documentation</a> for more details.
-
-The following entities are created by this package:\n
-(all entites are placed in the namespace sot::)
-\li sot::ZmprefFromCom
-\li sot::ForceCompensation
-\li sot::IntegratorForceExact
-\li sot::MassApparent
-\li sot::IntegratorForceRk4
-\li sot::IntegratorForce
-\li sot::AngleEstimator
-\li sot::WaistAttitudeFromSensor
-\li sot::Dynamic - provides the inverse dynamics computations for of a humanoid robot
-
-Optionally, if the packages in brackets are installed, the following entities
-are made available:
-\li sot::DynamicHrp2 - same as sot::Dynamic, but specialized for hrp2 robots [needs hrp2-dynamics]
-\li sot::DynamicHrp2_10 - same as previous, optimized for the hrp2-10 robot [needs hrp210optimized]
-\li sot::DynamicHrp2_10_old [needs hrp210optimized]
-
-See each entity's documentation page for more information (when available).
-
-\section References
-\anchor Mansard2007
-
-<b>"Task sequencing for sensor-based control"</b>,
-<em>N. Mansard, F. Chaumette,</em>
-IEEE Trans. on Robotics, 23(1):60-72, February 2007
-
-**/